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Software

spacer_matching_bench

📓 Jupyter Notebook ⭐ 0 📅 2025-11-04

No description available.

CapiBex

🦀 Rust ⭐ 0 📅 2025-08-26

two friends' rust exercise playground

bbmapy

🐍 Python ⭐ 0 📅 2025-08-20

A Python wrapper for BBTools. Current version of bbmapy is v39.20.

zsh-predict

🐚 Shell ⭐ 0 📅 2025-06-27

oh-my-zsh plugin using LLM to suggest/complete your current command.

urineri.github.io

🌐 HTML ⭐ 0 📅 2025-06-24

personal landing page

Gen2Mat

🐚 Shell ⭐ 0 📅 2025-06-20

Gene sharing matrix using cd-hit

what2do

🐍 Python ⭐ 0 📅 2025-06-13

Locate all TODOs from a given directory

import_mover

🐍 Python ⭐ 0 📅 2025-05-07

"Refactoring" tool that moves Python imports into the functions where they are used.

doi2bib

☕ JavaScript ⭐ 0 📅 2025-04-30

vibe coded chrome extension

bookmark-organizer

🐍 Python ⭐ 0 📅 2025-04-10

Coding exercise to increase productivity

splitit

🐍 Python ⭐ 0 📅 2025-03-23

Streamlit-based web app to track expenses across people using OCR on receipts

pyseff

🐍 Python ⭐ 0 📅 2025-01-31

quick and dirty alternative to seff (slurm job efficiency)

NeriMisc

📊 R ⭐ 0 📅 2022-04-14

Neri's Miscellaneous R helper functions

AresDown4

🐚 Shell ⭐ 0 📅 2020-12-31

Noise activated video capture (sort of)

gff2parquet

📓 Jupyter Notebook ⭐ 1 📅 2025-11-09

Utility CLI for handling GFF files (incl. converting to parquet)

Main

📦 Unknown ⭐ 1 📅 2025-10-15

RNA virus analysis toolkit, including a variety of commands and wrappers for external tools (from raw read processing to genome annotation).

Spacer Matching Bench

📦 Unknown ⭐ 1 📅 2025-10-02

No description available.

LSV

🐚 Shell ⭐ 1 📅 2024-02-13

Scripts and code used in the analyses of Haloferax volcanii 48N lemon-shaped virus

ColabScan

📓 Jupyter Notebook ⭐ 2 📅 2025-01-21

Making it easier for non-bioinfos to search their data for RdRps

RVMT

📊 R ⭐ 11 📅 2025-08-21

Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.